Online Software Help Manual

BookmarkIndexPrint
Contents
Display Legacy Contents

2D Preferences Dialog

The 2D data view has a lot of properties, which may be customized by the user in order to adapt the data presentation to his own requirements. Axis settings, coloring of objects, border settings and background color, etc. can be adjusted here. It may be useful to customize the cursor or zoom function.

For each data type, separate view settings are applied!

For user convenience, each data type provides individual display settings. The software will recognize them automatically.

 

The preferences dialog looks like this:

Loading 2D preferences

To load previously saved 2D preferences, please click on the button and select a saved preference file.

Saving 2D preferences

To save your personal 2D preferences, please click on the Save as button. Usually there is no need to explicitly save the preferences since all changes will automatically be saved when the dialog is closed. But if the user needs to often use different preferences he can save these by using the Save as button and specifying a configuration name.

Resetting 2D preferences

If the user is not satisfied with the changes he can revert back to the default 2D preferences. Clicking on the Reset button will reset all parameters to the default values.

Selecting a customizable property

On the left side of the dialog, a list with all customizable properties is available.

Click on one of the properties to select it. Adjustable parameters are updated automatically and will be displayed on the right.

Coordinate system options

These options control the look and feel of the axis coordinate system in the software. Coloring, backgrounds and grid settings can be adjusted for the 2D data view. The property section of the preferences dialog looks like this:

Label Color

The label color controls the font color of the axes legend. Click on the color field to change the color.

Data Area Color

This option controls the background color of the data view. Click on the color field to change the color.

Axis Area Background

This option controls the background color of the axis coordinate system. Click on the color field to change the color.

Grid Color

This option controls the color of the grid shown in the back of the data view. Click on the color field to change the color.

Label Font

This option controls the font style of the axis legend. The font, font size, and font style can be adjusted here. Expand the Label Font node to adjust particular font settings.

Grid Dash On

This parameter controls the size of visible grid dashes shown with the grid color.

Grid Dash Off

This parameter controls the size of transparent dashes shown with the grid color.

Grid Pen Width

This parameter controls the pen width used for drawing the dashed grid lines.

Show Grid

Enables or disables the grid.

Text

This option controls the font style of additional text in the coordinate system. The font, font size, and font style can be adjusted here. Expand the Additional Text Font node to adjust particular font settings.

Major Tick Steps X-Axis

This parameter defines the number of tickmarks for each major axis step on the x-axis.

Minor Tick Steps X-Axis

This parameter defines the number of tickmarks that divide each major step on the x-axis.

Show compressed X-Axis

This parameter only applies to IR spectra. In most cases, IR data is shown in wave number units on the X-Axis. In order to compensate the non-linear axis and emphasize lower wave numbers, the region above the Compression Position will be shown compressed.

Compression Ratio

This parameter defines the compression factor.

Compression Position

This parameter defines the position on the X-axis, where compression starts. By default this is around 2000 1/cm.

Major Tick Steps Y-Axis

This parameter defines the number of tickmarks for each major axis step on the y-axis.

Minor Tick Steps Y-Axis

This parameter defines the number of tickmarks that divide each major step on the y-axis.

Y-Axis Label Alignment

The orientation of the unit label on the Y-Axis can be toggled in order to save space. The unit label can be shown in horizontal or vertical orientation.

Show Logarithmic Axis

The Y-Axis can be shown a logarithmic axis in order to visualize logarithmic data as linear data. This parameter toggles data display.

Zooming

This section provides parameters for zooming in 2D data. By default the user can draw a rectangle for zooming into a particular region of data.

Current Area Selection

This parameter controls which zoom mode is applied. By default the rectangle zoom is used, which allows zooming in both axis directions at once. For some applications it might be useful to keep the y-axis direction and only zoom in x-axis direction.

  • Rectangle
    Zoom in x- and y-direction

  • Horizontal
    Zoom in x-direction only

Color

This parameter sets the background color of the zoom area while zooming.

Cursor

This section controls the mouse pointer layout and coloring. Furthermore the behavior of the mouse pointer can be changed.

Color

This parameter controls the color of the mouse pointer.

Width

This parameter control the line width of the cross hair lines drawing around the mouse pointer.

Spacing

This parameter controls the distance of the cross hair lines from the center of the mouse pointer.

Show Data Position

This parameter controls the tool tip help function. The tool tip help shows the actual cursor position in x- and y-values.

  • Yes
    The tool tip is shown

  • No
    The tool tip is invisible

Current Cursor

Various cursor modes are available controlling the behavior of the mouse pointer. The following modes are available:

  • Cross
    Shows an x,y cursor with four orthogonal cross hair lines indicating the position of the mouse pointer within the data view. The mouse pointer can be moved to any position within the data view without limitation.

  • Line
    Shows an x,y cursor with two vertical cross hair lines indicating the position of the mouse pointer within the data view. The mouse pointer can be moved to any position within the data view without limitation.

  • Surfing
    Shows an x,y cursor with four orthogonal cross hair lines indicating the position of the mouse pointer within the data view. The mouse pointer is forced to the graph of the active data object. When moved to a new position within the data view the center of the mouse pointer sticks to the graph slope.

  • Arrow
    Shows an x,y arrow cursor indicating the position of the mouse pointer within the data view. The mouse pointer can be moved to any position within the data view without limitation.

Favorite display area settings

The favorite display area controls the actual visible data view. By default all data objects are auto scaled on opening to show the full spectral range. If the show favorite area function is enabled, only the preferred region which has been previously defined by the user is applied as default visible data view instead.
The display properties for the favorite area can be modified on the right of the dialog:

Current view boundaries

These parameters show the coordinates of the current visible area of the 2D data view. Minimum and maximum data view coordinates for x and y of the actual data view are shown read only. To apply those coordinates as favorite display area, please follow the instructions below:

  1. While the 2D Preferences dialog is open, zoom to your favorite area in the 2D data view.

  2. Set the flag Apply Current Area As Favorite Area true in order to apply these coordinates as new favorite view settings. The data view and parameters in the category below are updated accordingly.

Favorite view boundaries

These parameters show the actual favorite area coordinates. The favorite display area can be modified manually by changing the Minimum X, Maximum X, Minimum Y and Maximum Y coordinates. Additionally, the favorite display area can be applied as default view for new data objects.

  1. Modify the Minimum X, Maximum X, Minimum Y and Maximum Y coordinates to your favorite view coordinates.

  2. Set the Enable Favorite View Area flag to Yes to enable your favorite display area.
    All open 2D data views containing data of this data type will be updated and new data views are opened automatically with your favorite display area.

Peak marker options

Peak markers are used to show peaks within the data view area. Display options for such peak markers can be adjusted here. For each data type, separate display options will be stored. When opening the preferences dialog, the preferences for the actual data type can be customized. The following peak marker properties are available:

Show Details

Peak information are available either as peak table or as peak markers. The user can decide whether to see the peak table, peak markers or both. This flag controls the display option:

  • Peak Table and Peak Markers (Show Both)
    Shows peak table and peak markers

  • Peak Markers
    Shows peak markers only.

  • Peak Table
    Shows the Peak Table only

Show Value

Displayed information on the peak marker can be customized. Either the x-axis value, the y-axis value or both can be shown on a peak marker within the data view.

  • x-axis value
    Shows the x-axis value of a peak

  • y-axis value
    Shows the y-axis value of a peak.

  • x- and y-axis values
    Shows the x-axis value and the y-axis value of a peak.

Show Marker on top of peak

Peak markers in a data view can be aligned to the top of the data view area or directly shown next to the peak.

  • Yes
    Peak markers are shown directly next to the peak.

  • No
    Peak markers are shown aligned on top of the data view.

Show start end markers

This flag indicates, whether start and end tick marks are visible in the data view.

  • Yes
    Start and end tick marks are visible.

  • No
    Start and end tick marks are hidden.

Fill peak

For some data types it might be useful to see the area underneath the graph slope and the baseline filled. This flag controls, whether the peak area underneath a peak is filled or not.

  • Yes
    Enables peak filling.

  • No
    Disables peak filling.

Peak marker font

The font and font size for peak markers shown within the data view area can be customized here.

Marker tail color

Each peak marker possesses a connecting line between the value and the corresponding peak. This line is called tail and the color can be customized here.

Displayed Decimals for X-Values

This option controls the number of decimals shown for the x-axis value shown on a peak marker. This number might be different from the default number of decimals available for data.

 Displayed Decimals for Y-Values

This option controls the number of decimals shown for the y-axis value shown on a peak marker. This number might be different from the default number of decimals available for data.

Calculation decimals

This option controls the number of decimals that are shown for the peak evaluation values in the peak table.

Show Legend

In the 2D data view the legend shows a list of all data objects within the current active data view. The active object is highlighted automatically in the legend.

In the 3D data view the legend shows a color coded area reflecting the actual intensity range of the 3D data object.

The user can activate an object by clicking the name in legend with the Left mouse button.

The following parameters can be adjusted for legend display:

Style

The legend style has the following options:

  • Auto
    The legend is shown automatically, whenever 2 or more data objects are visible in the current data view. If only one object is shown, the legend is invisible.

  • Always
    The legend is always shown.

  • Never
    The legend is never shown.

Text Color

This option configures the text color of the legend entries.

Text Font

This option configures the font, font size, font style, etc. parameters for the legend.

Has Background

This option configures, whether a background color is applied to the legend or the background remains transparent.

  • Yes
    The color given by the Background Color parameter is applied as background color for the legend.

  • No
    A transparent background color is used for the legend area.

Background Color

This option configures the background color of the legend. So if you like to color it, select a suitable color here.

Has Frame

This option configures, whether the legend is shown with or without border.

  • Yes
    The legend is surrounded by a border.

  • No
    The legend is shown without border.

Frame  Color

This option configures the frame color of the legend. So if you like to color it, select a suitable color here.

Visible Data Options

The visible data options control the appearance of 2D data objects in the current data view. General coloring, line style and special settings for 2D data can be adjusted here. For each data type, separate display options will be stored. These options are applied to all visible items in the data view. Actual color settings will be overridden on any changes. A list of visible items is also given below the Visible Data Options node for individual adjustments of each object.

Coloring Policy

When 2D data objects first enter the software, they will receive a curve color, line style, etc. The object will keep this style until it will be changed by the user. Several coloring policies are available to automate coloring and line style assignment for incoming data. The following policies are available:

  • Automatic (see screenshot above)
    The automatic coloring alternates the color for new incoming objects according to a pre-defined list of colors as shown in the lower part of the screen shot.
    Example:
    The first data object is blue-colored, the second is red-colored and so on.

  • Monochrome
    The monochrome coloring defines exactly one color, which is applied to all objects.

  • By Name
    Data receives a curve color depending on pre-defined conditions. The user is free to define conditions from any text information provided by the data, e.g. the file name or any label.
    Example:
    The color condition given below applies the blue color to all data objects containing a label called "TITLE" with a value "ref" somewhere in the name. The asterisk (*) symbol is used as wildcard. Naming is not case sensitive.

Fill Spectrum Area

This option configures, whether the area underneath the curve is filled with the curve color or not.

  • Yes
    The area underneath the data curve is filled.

  • No
    The area underneath the data curve is not filled.

Line Style

This option configures the line style of the curve. The following line style options are available:

  • Solid

  • Dash

  • Dot

  • Dash Dot

  • Dash Dot Dot

Line Width

This option configures the line width in pixels. By default 1 pixel is used.

Show Data Point Markers on Zoom

Whenever the user zooms into a spectral area in a way that the distance between two adjacent data points is large enough to show data point markers, they can be shown automatically.

  • Yes
    Data point markers will be shown automatically during zooming.

  • No
    No data point markers will be shown.

Example:

Show Spectrum Points as Lines

Instead of a data curve, each data point can also be visualized as vertical line to zero. This option is applied by default for mass spectra.

  • Yes
    Data points will be shown as vertical lines to zero.

  • No
    Data points will be shown as curve.

Example:

Spectrum x-Axis Orientation

This option controls the orientation of the x-axis. Available options are:

  • RightToLeft
    Standard orientation - x-axis values increase from right to left

  • LeftToRight
    Inverse orientation - x-axis values increase from left to right